owltools.ontologyverification.impl

Class AbstractCheck

java.lang.Object

owltools.ontologyverification.impl.AbstractCheck

All Implemented Interfaces:

OntologyCheck

Direct Known Subclasses:

AltIdInSignature, CycleCheck, DanglingReferenceCheck, NameRedundancyCheck, ObsoleteClassInSignature, SelfReferenceInDefinition

public abstract class AbstractCheck
extends Object
implements OntologyCheck

Helper to reduce boiler plate code for an OntologyCheck.

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	AbstractCheck(String id, String label, boolean fatal, OntologyCheckRunner.TimePoint timePoint)

Method Summary

Methods

Modifier and Type	Method and Description
boolean	equals(Object obj)
String	getID()
String	getLabel()
OntologyCheckRunner.TimePoint	getTimePoint() Get the OntologyCheckRunner.TimePoint for this check. If the check is to be run on multiple time points, create multiple instance.
int	hashCode()
boolean	isFatal()
void	setFatal(boolean fatal) Set the fatal parameter of the check.
void	setTimePoint(OntologyCheckRunner.TimePoint timePoint) Set the OntologyCheckRunner.TimePoint for this ontology check instance.

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface owltools.ontologyverification.OntologyCheck

check

Constructor Detail

AbstractCheck

protected AbstractCheck(String id,
             String label,
             boolean fatal,
             OntologyCheckRunner.TimePoint timePoint)

Parameters:

id -

label -

fatal -

timePoint -

Method Detail

isFatal

public boolean isFatal()

Specified by:

isFatal in interface OntologyCheck

Returns:

true if this a failing check is fatal and should stop OORT.

setFatal

public void setFatal(boolean fatal)

Description copied from interface: OntologyCheck

Set the fatal parameter of the check.

Specified by:

setFatal in interface OntologyCheck

getLabel

public String getLabel()

Specified by:

getLabel in interface OntologyCheck

Returns:

the printable label for this check.

getID

public String getID()

Specified by:

getID in interface OntologyCheck

Returns:

the ID for this check.

getTimePoint

public OntologyCheckRunner.TimePoint getTimePoint()

Description copied from interface: OntologyCheck

Get the OntologyCheckRunner.TimePoint for this check.
If the check is to be run on multiple time points, create multiple instance.

Specified by:

getTimePoint in interface OntologyCheck

Returns:

OntologyCheckRunner.TimePoint or null

setTimePoint

public void setTimePoint(OntologyCheckRunner.TimePoint timePoint)

Description copied from interface: OntologyCheck

Set the OntologyCheckRunner.TimePoint for this ontology check instance.

Specified by:

setTimePoint in interface OntologyCheck

hashCode

public int hashCode()

Overrides:

hashCode in class Object

equals

public boolean equals(Object obj)

Overrides:

equals in class Object