owltools.ontologyrelease.reports

Class OBOTermsIdsObsoleteReport

java.lang.Object

owltools.ontologyrelease.reports.OntologyReportGenerator.AbstractReport

owltools.ontologyrelease.reports.OBOTermsIdsObsoleteReport

All Implemented Interfaces:

OntologyReportGenerator.OntologyReport

public class OBOTermsIdsObsoleteReport
extends OntologyReportGenerator.AbstractReport

OntologyReportGenerator.OntologyReport for obsolete GeneOntology terms.

Constructor Summary

Constructors

Constructor and Description
OBOTermsIdsObsoleteReport(OWLGraphWrapper graph)
OBOTermsIdsObsoleteReport(String filePrefix)
OBOTermsIdsObsoleteReport(String filePrefix, String fileHeader)

Method Summary

Methods

Modifier and Type	Method and Description
protected String	getFileHeader()
String	getReportFileName() Get the target file name for this report.
void	handleTerm(PrintWriter writer, org.semanticweb.owlapi.model.OWLClass owlClass, OWLGraphWrapper graph) Handle an OWLObject during the report.

Methods inherited from class owltools.ontologyrelease.reports.OntologyReportGenerator.AbstractReport

end, getReportSubFolderName, start, writeTabs

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

OBOTermsIdsObsoleteReport

public OBOTermsIdsObsoleteReport(OWLGraphWrapper graph)

OBOTermsIdsObsoleteReport

public OBOTermsIdsObsoleteReport(String filePrefix)

OBOTermsIdsObsoleteReport

public OBOTermsIdsObsoleteReport(String filePrefix,
                         String fileHeader)

Method Detail

getReportFileName

public String getReportFileName()

Description copied from interface: OntologyReportGenerator.OntologyReport

Get the target file name for this report.

Returns:

fileName

getFileHeader

protected String getFileHeader()

Overrides:

getFileHeader in class OntologyReportGenerator.AbstractReport

handleTerm

public void handleTerm(PrintWriter writer,
              org.semanticweb.owlapi.model.OWLClass owlClass,
              OWLGraphWrapper graph)
                throws IOException

Description copied from interface: OntologyReportGenerator.OntologyReport

Handle an OWLObject during the report.

Throws:

IOException